STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QGF5Putative transcription factor C3H family. (308 aa)    
Predicted Functional Partners:
A0A2P6RMJ0
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.967
A0A2P6Q400
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.965
A0A2P6QR97
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.964
A0A2P6QRA9
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.964
A0A2P6PC10
Putative transcription factor C3H family.
  
  
 
0.901
A0A2P6RBG8
Putative transcription factor C3H family.
  
  
 
0.901
A0A2P6P723
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.686
A0A2P6PHL3
Serine/arginine-rich splicing factor SC35-like isoform X1.
   
 0.666
A0A2P6Q420
Putative nucleophile aminohydrolase.
   
 0.666
A0A2P6Q595
Putative glucan endo-1,3-beta-D-glucosidase.
   
 0.666
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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