STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QIG6Putative ACT domain-containing protein. (420 aa)    
Predicted Functional Partners:
A0A2P6SJB8
Putative [histone H3]-lysine-36 demethylase.
    
 0.804
A0A2P6PTW8
Putative histone H4, histone-fold protein.
   
 0.761
A0A2P6QIC4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.761
A0A2P6QIJ0
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.761
A0A2P6PE40
Putative chromatin regulator PHD family.
    
  0.709
A0A2P6PFG0
Putative chromatin regulator PHD family.
    
  0.709
A0A2P6PGX7
Putative chromatin regulator PHD family.
    
  0.709
A0A2P6PR77
Putative chromatin regulator PHD family.
    
  0.709
A0A2P6Q4A4
Putative chromatin regulator PHD family.
    
  0.709
A0A2P6R7S5
Putative chromatin regulator PHD family.
    
  0.709
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.