STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QPF9Putative pentatricopeptide. (56 aa)    
Predicted Functional Partners:
A0A2P6SC50
Putative transcription factor NAM family.
  
   0.553
A0A2P6SIW2
Putative transcription factor NAM family.
  
   0.552
A0A2P6S983
Putative DNA (Cytosine-5-)-methyltransferase.
  
 
  0.551
A0A2P6SH58
Putative tetratricopeptide-like helical domain-containing protein.
  
    0.548
A0A2P6SIX8
Putative transcription factor NAM family.
  
   0.546
A0A2P6SIY7
Putative transcription factor NAM family.
  
   0.546
A0A2P6SIX5
Putative transcription factor NAM family.
  
   0.545
A0A2P6SAD5
Putative non-specific serine/threonine protein kinase.
  
   0.544
A0A2P6SJ07
Putative transcription factor NAM family.
  
   0.544
A0A2P6SP29
Uncharacterized protein.
  
     0.540
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.