STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QSU5Putative rmlC-like jelly roll, cyclic nucleotide-binding protein. (200 aa)    
Predicted Functional Partners:
A0A2P6Q4T7
Protein kinase domain-containing protein.
     
  0.650
A0A2P6Q5C6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
A0A2P6Q641
Protein kinase domain-containing protein.
     
  0.650
A0A2P6SHQ0
Putative cellulose synthase (UDP-forming).
  
  
  0.535
A0A2P6QRG2
Putative cellulose synthase (UDP-forming).
  
  
  0.534
A0A2P6RBS1
Putative (S)-2-hydroxy-acid oxidase.
  
    0.534
A0A2P6RTC7
Putative cellulose synthase (UDP-forming).
  
  
  0.533
A0A2P6SMZ9
Putative transcription factor AS2-LOB family.
  
     0.533
A0A2P6Q8P6
Putative transcription factor bHLH family.
  
     0.530
A0A2P6PM46
Uncharacterized protein.
  
     0.529
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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