STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QT92Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
A0A2P6Q0Z7
Putative transcription factor WD40-like family.
   
 0.995
A0A2P6RWF6
Putative transcription factor WD40-like family.
   
 0.994
A0A2P6PBK1
Putative transcription factor WD40-like family.
   
 0.993
A0A2P6R6C5
Putative Nop domain-containing protein.
   
 0.993
A0A2P6RD79
Putative suppressor of forked, tetratricopeptide-like helical domain, nucleic acid-binding protein.
   
 0.993
A0A2P6P522
Putative Nop domain-containing protein.
   
 0.991
A0A2P6Q0Z2
Uncharacterized protein.
   
 0.991
A0A2P6P5S9
Putative U3 small nucleolar ribonucleoprotein complex, subunit Mpp10.
   
 0.990
A0A2P6Q635
Putative transcription factor WD40-like family.
   
 0.989
A0A2P6PCI6
Putative sas10 domain-containing protein.
   
 0.988
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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