STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QZL8Putative palmitoyl-protein hydrolase. (108 aa)    
Predicted Functional Partners:
A0A2P6QFH7
Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer.
    
   0.615
A0A2P6RIW9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.615
A0A2P6RKB2
Putative ribosomal protein S16.
    
   0.615
A0A2P6S2P3
Putative ferroxidase.
    
   0.615
A0A2P6SC48
Putative ribosomal protein/NADH dehydrogenase.
    
   0.615
A0A2P6PU80
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
     
 0.493
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
 
 0.491
A0A2P6PCB2
Putative ribosomal protein L33.
   
   0.486
A0A2P6QY03
Putative ribosomal protein L33.
   
   0.486
A0A2P6PC17
Putative ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.485
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.