STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QZU4Putative ubiquitinyl hydrolase 1. (277 aa)    
Predicted Functional Partners:
A0A2P6Q0M4
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.488
A0A2P6RNM4
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.488
A0A2P6P9J2
Putative Zf-FLZ domain-containing protein.
  
     0.435
A0A2P6RN53
Reticulon-like protein.
  
 
   0.428
A0A2P6SA37
DUF295 domain-containing protein.
  
     0.425
A0A2P6PSZ8
Putative F-box domain-containing protein.
  
 
   0.423
A0A2P6RKD5
Putative histone acetyltransferase.
  
     0.419
A0A2P6RJ63
Putative proteasome endopeptidase complex; Belongs to the AAA ATPase family.
   
  0.412
A0A2P6RLX7
Putative F-box domain-containing protein.
  
 
   0.411
A0A2P6RLI6
DUF295 domain-containing protein.
  
     0.406
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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