STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6R0H1Putative peptidase M28. (873 aa)    
Predicted Functional Partners:
A0A2P6QSP4
Putative oxysterol-binding protein; Belongs to the OSBP family.
   
 
  0.614
A0A2P6SPY4
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
   
 
 0.595
A0A2P6R4P8
Putative transcription factor WD40-like family.
     
 0.580
A0A2P6PSV5
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 0.567
A0A2P6PZ39
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.549
A0A2P6QSA5
Putative endonuclease I.
     
 0.549
A0A2P6P3E5
Putative Rhodanese-like domain-containing protein.
     
 0.538
A0A2P6P9Z8
Putative clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
     
 0.538
A0A2P6PRP2
Putative metallocarboxypeptidase D.
     
 0.502
A0A2P6P6R9
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.496
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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