STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6R4E8Glutamate decarboxylase; Belongs to the group II decarboxylase family. (500 aa)    
Predicted Functional Partners:
A0A2P6S0T8
Putative transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.950
A0A2P6P2G9
Putative L-glutamate gamma-semialdehyde dehydrogenase.
   
 0.944
A0A2P6P8X9
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.942
A0A2P6RHN0
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.942
A0A2P6RXW7
Putative glutamate dehydrogenase (NADP(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.942
A0A2P6SM19
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.942
A0A2P6PUG7
Putative pantoate--beta-alanine ligase (AMP-forming).
  
 
 0.937
A0A2P6P536
Putative argininosuccinate synthase.
     
 0.917
A0A2P6SNZ7
Putative glutamate synthase (NADH).
     
 0.916
A0A2P6RJZ8
Putative aminoacyltransferase, Omega peptidase.
     
 0.913
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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