STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6R4H2Putative defensin, plant; Belongs to the DEFL family. (80 aa)    
Predicted Functional Partners:
A0A2P6SLS1
Putative endopeptidase Clp.
  
    0.528
A0A2P6Q4Z7
Uncharacterized protein.
  
     0.526
A0A2P6P3L6
Putative heavy metal-associated domain, HMA.
  
     0.518
A0A2P6S4J3
Putative F-box domain-containing protein.
  
     0.511
A0A2P6PLA3
Putative histone deacetylase superfamily, Zinc finger, UBP-type, Zinc finger, RING/FYVE/PHD-type.
  
     0.495
A0A2P6PPI4
Putative alpha-L-fucosidase.
  
     0.495
A0A2P6RXD0
Uncharacterized protein.
  
     0.493
A0A2P6S2R6
Uncharacterized protein.
  
     0.490
A0A2P6QIN2
Putative Metallothionein, family 15, plant.
  
    0.489
A0A2P6S2T9
Uncharacterized protein.
  
     0.487
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.