STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
A0A2P6R5214-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. (166 aa)    
Predicted Functional Partners:
A0A2P6PLF1
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
      
 0.483
A0A2P6RHM0
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
      
 0.483
A0A2P6RP57
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
      
 0.483
A0A2P6P2V3
Flavin-containing monooxygenase.
      
 0.481
A0A2P6PZL4
Flavin-containing monooxygenase.
      
 0.481
A0A2P6RKW6
Flavin-containing monooxygenase.
      
 0.481
LSM1-2
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
      
 0.481
A0A2P6PUP0
Flavin-containing monooxygenase.
      
 0.476
A0A2P6PZW9
Flavin-containing monooxygenase.
      
 0.476
A0A2P6RJF7
Flavin-containing monooxygenase.
      
 0.476
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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