STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6R709Putative F-box domain, LysM domain-containing protein. (280 aa)    
Predicted Functional Partners:
A0A2P6R6X5
Putative alpha/Beta hydrolase.
      
 0.465
A0A2P6SCJ3
Putative dynamin central domain, Dynamin superfamily.
  
     0.464
A0A2P6PUF2
Uncharacterized protein.
  
     0.434
A0A2P6PHR9
Putative Dynamin superfamily, P-loop containing nucleoside triphosphate hydrolase.
  
     0.429
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.