STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RD29Putative ubiquitin. (213 aa)    
Predicted Functional Partners:
A0A2P6P5L9
Putative PB1 domain, Zinc finger, ZZ-type, Next to BRCA1, central domain-containing protein.
   
 0.947
A0A2P6P5Q9
Putative PB1 domain-containing protein.
   
 0.947
A0A2P6PUF0
Putative transcription factor interactor and regulator LIM family.
   
 0.874
A0A2P6QP31
Putative transcription factor interactor and regulator LIM family.
   
 0.874
A0A2P6RAL0
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme.
   
 0.822
A0A2P6QYW6
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
  0.785
A0A2P6PKX4
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme.
   
 0.780
A0A2P6PKY7
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme.
   
 0.780
A0A2P6PKY9
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme.
   
 0.780
A0A2P6R7T4
Uncharacterized protein.
   
 0.780
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.