STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RED6Putative transcription factor WD40-like family. (383 aa)    
Predicted Functional Partners:
A0A2P6P1Q3
Uncharacterized protein.
    
 0.987
A0A2P6Q1N1
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.968
A0A2P6Q605
Putative transcription factor C3H family.
   
 0.956
A0A2P6Q633
Putative transcription factor C3H family.
   
 0.956
A0A2P6PCX5
Putative KH-domain/beta-lactamase-domain protein, archaea.
   
 0.952
A0A2P6QSG7
Putative KH-domain/beta-lactamase-domain protein, archaea.
   
 0.952
A0A2P6QZ09
Putative pre-mRNA polyadenylation factor Fip1.
   
 0.943
A0A2P6RIC1
Putative pre-mRNA polyadenylation factor Fip1.
   
 0.943
A0A2P6PG16
Putative symplekin.
    
 0.935
A0A2P6R941
Putative symplekin/Pta1.
    
 0.935
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.