Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P6QAK6 | A0A2P6QBW0 | Putative oxidoreductase. | Putative acryloyl-CoA reductase (NADH). | 0.717 |
A0A2P6QAK6 | A0A2P6RFJ6 | Putative oxidoreductase. | Putative 4-coumarate--CoA ligase. | 0.485 |
A0A2P6QAK6 | A0A2P6RMR3 | Putative oxidoreductase. | Putative AMP-dependent synthetase/ligase. | 0.451 |
A0A2P6QAK6 | A0A2P6SCU4 | Putative oxidoreductase. | Putative L-aminoadipate-semialdehyde dehydrogenase transcription factor WD40-like family. | 0.451 |
A0A2P6QAK6 | A0A2P6SCV8 | Putative oxidoreductase. | Putative L-aminoadipate-semialdehyde dehydrogenase transcription factor WD40-like family. | 0.451 |
A0A2P6QBW0 | A0A2P6QAK6 | Putative acryloyl-CoA reductase (NADH). | Putative oxidoreductase. | 0.717 |
A0A2P6QBW0 | A0A2P6RFJ6 | Putative acryloyl-CoA reductase (NADH). | Putative 4-coumarate--CoA ligase. | 0.501 |
A0A2P6QBW0 | A0A2P6RKH8 | Putative acryloyl-CoA reductase (NADH). | Elf4 domain-containing protein. | 0.717 |
A0A2P6QBW0 | A0A2P6RMR3 | Putative acryloyl-CoA reductase (NADH). | Putative AMP-dependent synthetase/ligase. | 0.491 |
A0A2P6QBW0 | A0A2P6SCU4 | Putative acryloyl-CoA reductase (NADH). | Putative L-aminoadipate-semialdehyde dehydrogenase transcription factor WD40-like family. | 0.491 |
A0A2P6QBW0 | A0A2P6SCV8 | Putative acryloyl-CoA reductase (NADH). | Putative L-aminoadipate-semialdehyde dehydrogenase transcription factor WD40-like family. | 0.491 |
A0A2P6R0G7 | A0A2P6RFJ6 | Putative nucleoporin Nup54/Nup57/Nup44, nucleoporin Nup54, alpha-helical domain-containing protein. | Putative 4-coumarate--CoA ligase. | 0.555 |
A0A2P6R3T8 | A0A2P6R605 | Putative mediator complex, subunit Med23. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.995 |
A0A2P6R3T8 | A0A2P6RFJ6 | Putative mediator complex, subunit Med23. | Putative 4-coumarate--CoA ligase. | 0.615 |
A0A2P6R3T8 | A0A2P6SM21 | Putative mediator complex, subunit Med23. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.992 |
A0A2P6R605 | A0A2P6R3T8 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Putative mediator complex, subunit Med23. | 0.995 |
A0A2P6R605 | A0A2P6RFJ6 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Putative 4-coumarate--CoA ligase. | 0.580 |
A0A2P6R605 | A0A2P6SM21 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.996 |
A0A2P6RFJ6 | A0A2P6QAK6 | Putative 4-coumarate--CoA ligase. | Putative oxidoreductase. | 0.485 |
A0A2P6RFJ6 | A0A2P6QBW0 | Putative 4-coumarate--CoA ligase. | Putative acryloyl-CoA reductase (NADH). | 0.501 |
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