STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RFJ6Putative 4-coumarate--CoA ligase. (52 aa)    
Predicted Functional Partners:
A0A2P6R3T8
Putative mediator complex, subunit Med23.
    
 0.615
A0A2P6RMR3
Putative AMP-dependent synthetase/ligase.
  
 0.597
A0A2P6SCU4
Putative L-aminoadipate-semialdehyde dehydrogenase transcription factor WD40-like family.
  
 0.597
A0A2P6SCV8
Putative L-aminoadipate-semialdehyde dehydrogenase transcription factor WD40-like family.
  
 0.597
A0A2P6R605
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 0.580
A0A2P6R0G7
Putative nucleoporin Nup54/Nup57/Nup44, nucleoporin Nup54, alpha-helical domain-containing protein.
    
 0.555
A0A2P6SM21
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.547
A0A2P6QBW0
Putative acryloyl-CoA reductase (NADH).
  
 
 0.501
A0A2P6QAK6
Putative oxidoreductase.
  
 
 0.485
A0A2P6RKH8
Elf4 domain-containing protein.
  
 
 0.485
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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