STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RG17Putative transcription factor WD40-like family. (317 aa)    
Predicted Functional Partners:
A0A2P6PC30
Putative 43kDa postsynaptic protein.
    
 0.912
A0A2P6RXG5
Putative RNA polymerase II associated factor Paf1.
   
 0.875
A0A2P6P2Z4
Putative leo1-like protein.
    
 0.864
A0A2P6QJM0
Putative RNA helicase.
    
 0.807
A0A2P6QJM5
Putative RNA helicase.
    
 0.807
A0A2P6Q3Q2
Putative RNA polymerase-associated protein Ctr9.
    
 0.759
A0A2P6RKK7
Putative 43kDa postsynaptic protein.
    
 0.759
A0A2P6QWN9
Putative Cell division control protein.
    
 0.753
A0A2P6Q132
Putative transcription factor WD40-like family.
  
 
0.711
A0A2P6QS47
Putative RNA helicase.
    
 0.651
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.