STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RJE1Putative ankyrin repeat-containing domain, P-loop containing nucleoside triphosphate hydrolase. (479 aa)    
Predicted Functional Partners:
A0A2P6PWF2
Putative nuclear pore localization protein NPL4.
   
 0.931
A0A2P6R4P0
UBX domain-containing protein.
    
 0.922
A0A2P6QCA3
Putative ubiquitinyl hydrolase 1.
   
 0.905
A0A2P6R9C6
Putative ubiquitinyl hydrolase 1.
   
 0.885
A0A2P6PNP2
Putative transcription factor WD40-like family.
   
 
 0.844
A0A2P6R604
Putative peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.796
A0A2P6QWM9
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.777
A0A2P6QX11
Putative proteasome endopeptidase complex.
   
 0.777
A0A2P6Q2S4
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.764
A0A2P6RJX6
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.764
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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