STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RM03Putative transcription factor YEATS family. (275 aa)    
Predicted Functional Partners:
A0A2P6RLV7
Putative non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
   
 0.880
A0A2P6PI22
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.870
A0A2P6RFD2
Putative transcription factor MYB-HB-like family.
   
 0.869
A0A2P6RQU6
Putative peptidase S8 propeptide/proteinase inhibitor I9.
   
 0.869
A0A2P6PV92
Uncharacterized protein.
    
 0.839
A0A2P6Q8L7
Putative DNA helicase chromatin remodeling SNF2 family.
    
 0.837
A0A2P6SPL2
Putative Vps72/YL1 family protein.
    
 0.834
A0A2P6QYW9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.821
A0A2P6PNL7
Putative DNA-directed RNA polymerase.
   
 0.820
A0A2P6Q9I9
Putative Actin family; Belongs to the actin family.
   
 0.816
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.