STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RN49Putative pseudouridine synthase, catalytic domain-containing protein. (93 aa)    
Predicted Functional Partners:
A0A2P6R646
Putative tRNA pseudouridine(13) synthase.
    
 
 0.766
A0A2P6PQE8
Uncharacterized protein.
  
 
 0.729
A0A2P6REC8
Putative GTP-binding protein, orthogonal bundle.
   
 
 0.702
A0A2P6QBM3
Putative ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
   0.682
A0A2P6SC48
Putative ribosomal protein/NADH dehydrogenase.
   
   0.679
A0A2P6QZP0
Putative ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.599
A0A2P6SDK7
Putative ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.599
A0A2P6PHX3
Putative GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.592
A0A2P6QB05
Putative nucleoside-triphosphate phosphatase.
  
 
 0.592
A0A2P6RG14
Putative GTP-binding protein EngA.
  
 
 0.592
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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