STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RPD1Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (501 aa)    
Predicted Functional Partners:
A0A2P6SAU8
Putative dihydroxy-acid dehydratase.
  
 0.984
A0A2P6QNQ3
Putative 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).
  
 0.957
A0A2P6RR96
Putative 2-isopropylmalate synthase.
  
 0.952
A0A2P6RSP7
Putative oxidoreductase.
  
 
 0.947
A0A2P6SHY4
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
    
 0.934
A0A2P6SHY8
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
    
 0.934
A0A2P6S4B7
Putative cystathionine gamma-synthase.
   
 0.920
A0A2P6P711
Putative glutamate--cysteine ligase.
    
  0.901
A0A2P6PKR3
Putative homoserine dehydrogenase, Aspartate kinase.
  
 
 0.882
A0A2P6QGI3
Threonine dehydratase.
  
 
 0.880
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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