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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RVT8Putative transcription factor WD40-like family. (1139 aa)    
Predicted Functional Partners:
A0A2P6PLB2
Putative histone deacetylase.
    
 0.667
A0A2P6P7B8
Putative transcription factor GRAS family; Belongs to the GRAS family.
      
 0.624
A0A2P6RJI1
Putative transcription factor Lambda-DB family.
      
 0.623
A0A2P6SMF6
Uncharacterized protein.
      
 0.623
A0A2P6QW94
Putative DNA helicase.
   
 0.584
A0A2P6QY26
Putative DNA helicase chromatin remodeling SNF2 family.
   
 0.584
A0A2P6PQ30
Putative transcription factor WD40-like family.
    
 0.539
A0A2P6QFS3
Putative B30.2/SPRY domain, concanavalin A-like lectin/glucanase domain-containing protein.
    
 0.537
A0A2P6SHQ0
Putative cellulose synthase (UDP-forming).
  
 
  0.534
A0A2P6QRG2
Putative cellulose synthase (UDP-forming).
  
 
  0.532
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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