STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RYE1Uncharacterized protein. (552 aa)    
Predicted Functional Partners:
A0A2P6QW94
Putative DNA helicase.
   
 0.580
A0A2P6QY26
Putative DNA helicase chromatin remodeling SNF2 family.
   
 0.580
A0A2P6P6M4
Putative transcription factor WD40-like family.
    
 0.550
A0A2P6PQ30
Putative transcription factor WD40-like family.
    
 0.539
A0A2P6QFS3
Putative B30.2/SPRY domain, concanavalin A-like lectin/glucanase domain-containing protein.
    
 0.537
A0A2P6RLM2
NUC153 domain-containing protein.
   
  
 0.518
A0A2P6PSZ8
Putative F-box domain-containing protein.
  
 
  0.507
A0A2P6P8H2
Putative Agenet-like domain-containing protein.
  
 
  0.504
A0A2P6R9F6
Putative non-specific serine/threonine protein kinase; Belongs to the leguminous lectin family.
  
 
  0.501
A0A2P6SGN4
Uncharacterized protein.
  
     0.493
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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