STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6RZC9Putative transcription factor & chromatin remodeling DDT family. (1174 aa)    
Predicted Functional Partners:
A0A2P6PWE5
Putative Homeobox domain-containing protein.
  
   
 0.607
A0A2P6QKG7
Uncharacterized protein.
  
     0.523
A0A2P6RCM2
Uncharacterized protein.
  
     0.522
A0A2P6RCW6
Uncharacterized protein.
  
     0.522
A0A2P6QXE2
Putative alpha/Beta hydrolase.
  
     0.507
A0A2P6SFB6
Putative transcription factor MADS-type1 family.
  
     0.507
A0A2P6RMP3
Uncharacterized protein.
  
     0.506
A0A2P6RM05
Putative interactor of constitutive active ROPs.
  
     0.504
A0A2P6PQS0
Putative pentatricopeptide.
  
     0.503
A0A2P6QUE2
Uncharacterized protein.
  
     0.500
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.