STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6S1V4Uncharacterized protein. (565 aa)    
Predicted Functional Partners:
A0A2P6RK75
Putative fanconi Anaemia group E protein.
  
   
 0.742
A0A2P6QYR3
Putative fanconi anemia group I protein.
  
   
 0.693
A0A2P6QUN7
Putative thioredoxin-like protein.
  
  
 0.656
A0A2P6S0Y7
Putative fanconi anaemia protein FANCD2.
  
   
 0.654
A0A2P6PUY1
Uncharacterized protein.
  
   
 0.636
A0A2P6RJJ6
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
  
   
 0.617
A0A2P6P678
Uncharacterized protein.
  
   
 0.612
A0A2P6RMN7
Putative tetratricopeptide-like helical domain-containing protein.
  
   
 0.572
A0A2P6RPG6
Putative chromatin regulator PHD family.
  
   
 0.564
A0A2P6QWK3
Putative sterol 14-alpha-demethylase transcription factor MYB-HB-like family.
  
 
   0.510
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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