STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6S478Putative Cell division topological specificity factor MinE, calycin. (403 aa)    
Predicted Functional Partners:
A0A2P6PWC2
Putative non-specific serine/threonine protein kinase.
  
     0.527
A0A2P6P967
Putative acyl-CoA oxidase.
  
     0.514
A0A2P6RUA0
Uncharacterized protein.
  
     0.509
A0A2P6Q8F6
Putative peroxidase.
  
     0.506
A0A2P6RY64
Putative IQ motif, EF-hand binding protein.
  
     0.504
A0A2P6PNB7
Putative cold-regulated 413 protein.
  
     0.499
A0A2P6Q0H1
Putative P-loop containing nucleoside triphosphate hydrolase.
  
     0.498
A0A2P6QBB1
Putative phosphate-transporting ATPase.
  
     0.494
A0A2P6SFU4
Putative cupredoxin.
  
     0.492
A0A2P6SKR8
Putative Blue (Type 1) copper binding protein.
  
     0.491
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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