Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A2P6SCA6Putative transcription factor interactor and regulator CCHC(Zn) family. (164 aa)    
Predicted Functional Partners:
A0A2P6PCR1
Putative RNA helicase.
   
 0.790
A0A2P6PD13
Putative RNA helicase.
   
 0.790
A0A2P6QS47
Putative RNA helicase.
   
 0.790
A0A2P6SMH1
Putative eukaryotic rRNA processing.
   
   0.714
A0A2P6QAZ8
Putative ribosome biogenesis protein BRX1.
   
   0.702
A0A2P6QFA1
Putative nuclear cap-binding protein subunit 1.
    
 
 0.692
A0A2P6R363
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 
 0.689
A0A2P6QDG0
Putative rRNA-processing protein Efg1.
   
   0.678
A0A2P6QYP3
Putative armadillo-like helical, CPL domain-containing protein.
   
   0.619
A0A2P6RFX2
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.509
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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