STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6SE81Uncharacterized protein. (66 aa)    
Predicted Functional Partners:
A0A2P6REC8
Putative GTP-binding protein, orthogonal bundle.
  
 
 0.931
A0A2P6PQE8
Uncharacterized protein.
   
 
 0.910
A0A2P6QBM3
Putative ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.897
A0A2P6RNB5
Putative ribosomal protein L25.
   
 
 0.872
A0A2P6SC48
Putative ribosomal protein/NADH dehydrogenase.
   
   0.872
A0A2P6RIW9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.853
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.841
A0A2P6Q827
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.841
A0A2P6P7Y3
Putative aminoacyl-tRNA hydrolase.
  
 
 0.840
A0A2P6R646
Putative tRNA pseudouridine(13) synthase.
    
   0.832
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.