STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6SFR4Putative leucine-rich repeat domain, L domain-containing protein. (327 aa)    
Predicted Functional Partners:
A0A2P6PFU3
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.522
A0A2P6QPL9
Putative TIR domain, winged helix-turn-helix DNA-binding domain-containing protein.
  
     0.519
A0A2P6QUK7
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.509
A0A2P6PKP3
Putative winged helix-turn-helix DNA-binding domain-containing protein.
  
     0.506
A0A2P6QVN9
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.496
A0A2P6PKN4
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.494
A0A2P6RFH3
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.488
A0A2P6PJS4
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.486
A0A2P6PV25
Putative P-loop containing nucleoside triphosphate hydrolase.
  
     0.486
A0A2P6S761
Putative TIR domain, P-loop containing nucleoside triphosphate hydrolase.
  
     0.485
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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