STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6SHA0Putative bestrophin/UPF0187. (416 aa)    
Predicted Functional Partners:
A0A2P6S925
Putative KH-domain/beta-lactamase-domain protein, archaea.
    
 0.518
A0A2P6QRM7
Putative integrator complex subunit 7.
    
 0.497
A0A2P6R8N4
Uncharacterized protein.
    
 0.432
A0A2P6R8R5
Uncharacterized protein.
    
 0.432
A0A2P6PTK5
Chloride channel protein.
    
 
 0.416
A0A2P6PWC3
Putative nucleic acid-binding protein.
    
  0.413
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.