STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6SIC0Putative zinc-ribbon domain, plant protein. (922 aa)    
Predicted Functional Partners:
A0A2P6R103
Uncharacterized protein.
    
 0.603
A0A2P6R1E2
Putative histone chaperone ASF1.
    
 0.567
A0A2P6RSC0
Putative transcription factor C3H family.
  
 
  0.545
A0A2P6RHV1
Uncharacterized protein.
  
 
  0.539
A0A2P6S7D0
Putative transcription factor bHLH family.
  
  0.534
A0A2P6SBR3
Uncharacterized protein.
  
  
  0.529
A0A2P6S0M8
Uncharacterized protein.
  
 
  0.528
A0A2P6R9F4
Uncharacterized protein.
  
 
   0.519
A0A2P6QLY3
Putative transcription factor bHLH family.
  
  0.517
A0A2P6P311
Putative transcription factor MYB family.
  
     0.516
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.