STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6SL78Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
A0A2P6RC74
Putative transcription factor WD40-like family.
   
 
 0.713
A0A2P6S6T4
Putative transcription factor WD40-like family.
   
 
 0.713
A0A2P6SPH3
Putative transcription factor WD40-like family.
   
 
 0.713
A0A2P6QBW1
Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase.
    
   0.668
A0A2P6S2D1
Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase.
    
   0.668
A0A2P6RJP0
Putative cGMP-dependent protein kinase AGC-PKA-PKG family.
   
 
 0.647
A0A2P6REI2
Peptidyl-prolyl cis-trans isomerase.
    
 0.589
A0A2P6RA97
Uncharacterized protein.
  
 
   0.538
A0A2P6QID8
Putative Jas TPL-binding domain-containing protein.
  
     0.534
A0A2P6QHD1
Putative ankyrin repeat-containing domain, PGG domain-containing protein.
  
 
   0.530
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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