STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6SPQ2Putative transcription factor B3-Domain family. (518 aa)    
Predicted Functional Partners:
A0A2P6R605
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.488
A0A2P6PVM5
Putative transcription factor bZIP family.
    
 
 0.460
A0A2P6PZU7
Putative transcription factor bZIP family.
    
 
 0.460
A0A2P6R5Y5
Putative transcription factor bZIP family.
    
 
 0.460
A0A2P6QGT5
Uncharacterized protein.
  
     0.452
A0A2P6QPA7
Putative pentatricopeptide.
  
     0.425
A0A2P6QP79
Putative pentatricopeptide.
  
     0.424
A0A2P6RMX4
Putative transcription factor B3-Domain family.
  
     0.424
A0A2P6Q0H5
Putative tetratricopeptide-like helical domain-containing protein.
  
     0.411
A0A2P6RCA8
Uncharacterized protein.
  
     0.406
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.