Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFL81146.1Hypothetical protein; TIGRFAM: Por secretion system C-terminal sorting domain. (529 aa)    
Predicted Functional Partners:
AFL81009.1
Hypothetical protein.
 
     0.610
AFL81011.1
Hypothetical protein; TIGRFAM: Por secretion system C-terminal sorting domain.
 
     0.479
AFL81145.1
Hypothetical protein; TIGRFAM: Por secretion system C-terminal sorting domain.
 
    
0.455
AFL81147.1
Hypothetical protein; TIGRFAM: Por secretion system C-terminal sorting domain.
 
    
0.455
AFL81539.1
Regulatory P domain of subtilisin-like proprotein convertases; PFAM: HYR domain; Proprotein convertase P-domain; TIGRFAM: Por secretion system C-terminal sorting domain.
  
 
   0.441
AFL82236.1
Hypothetical protein.
  
     0.441
AFL81148.1
Hypothetical protein; TIGRFAM: Por secretion system C-terminal sorting domain.
 
  
0.409
AFL81524.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
   0.405
Your Current Organism:
Aequorivita sublithincola
NCBI taxonomy Id: 746697
Other names: A. sublithincola DSM 14238, Aequorivita sublithincola 9-3, Aequorivita sublithincola DSM 14238, Aequorivita sublithincola str. DSM 14238, Aequorivita sublithincola strain DSM 14238
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