Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFL82632.1Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family. (61 aa)    
Predicted Functional Partners:
AFL82168.1
PFAM: Protein of unknown function (DUF1328).
 
    0.779
AFL80964.1
Hypothetical protein; PFAM: Family of unknown function (DUF500).
  
    0.631
AFL80357.1
PFAM: Protein of unknown function (DUF1458).
   
    0.552
AFL82633.1
Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family.
       0.521
AFL81664.1
PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily.
  
  
 0.505
AFL82631.1
Peroxiredoxin; PFAM: AhpC/TSA family; TIGRFAM: Por secretion system C-terminal sorting domain.
       0.464
AFL82563.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.463
AFL81031.1
Putative stress protein (general stress protein 26); PFAM: Pyridoxamine 5'-phosphate oxidase.
  
    0.439
AFL81689.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
  
    0.437
AFL81679.1
PFAM: Polysaccharide biosynthesis/export protein.
   
    0.410
Your Current Organism:
Aequorivita sublithincola
NCBI taxonomy Id: 746697
Other names: A. sublithincola DSM 14238, Aequorivita sublithincola 9-3, Aequorivita sublithincola DSM 14238, Aequorivita sublithincola str. DSM 14238, Aequorivita sublithincola strain DSM 14238
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