STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIR_0707800Serine/threonine protein kinase. (228 aa)    
Predicted Functional Partners:
RIR_2546500
Calcium binding protein 39.
    
 
 0.825
RIR_3481900
Striatin 1/3/4.
    
 
 0.803
RIR_0495600
T-complex protein 1, theta subunit-1.
    
   0.765
RIR_0755100
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
   0.756
RIR_2175600
Mob1 family protein.
    
 
 0.748
RIR_2332800
Cell cycle arrest in response to pheromone-related protein.
    
 
 0.742
RIR_0844900
Protein tyrosine phosphatase-like protein.
    
   0.728
RIR_0488300
Metallo-dependent phosphatase-like protein.
    
 
 0.718
RIR_0162500
Serine/threonine-protein phosphatase.
    
 
 0.718
RIR_0136300
G-patch domain-containing protein.
    
 0.610
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.