STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEE13688.1Carbon-monoxide dehydrogenase, catalytic subunit; COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterPro IPR010047:IPR004137; KEGG: drt:Dret_1234 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; PRIAM: Carbon-monoxide dehydrogenase (acceptor); SPTR: Carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: Carbon-monoxide dehydrogenase, catalytic subunit; IMG reference gene:2504783399; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit. (627 aa)    
Predicted Functional Partners:
AEE13687.1
Cobyrinic acid ac-diamide synthase; COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR002586; KEGG: dba:Dbac_0933 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; IMG reference gene:2504783398; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
   
 0.976
AEE14671.1
Formate dehydrogenase, alpha subunit; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006478:IPR001041:IPR019574:IPR001450:IPR 006963:IPR006656:IPR006657; KEGG: pmo:Pmob_0386 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: Formate dehydrogenase, alpha subunit; IMG reference gene:25 [...]
    
 0.934
AEE14028.1
COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: cte:CT1717 tungsten formylmethanofuran dehydrogenase, subunit E, putative; PFAM: Formylmethanofuran dehydrogenase, subunit E region; SPTR: Putative uncharacterized protein; IMG reference gene:2504783761; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
  
  
  0.929
AEE14760.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: shn:Shewana3_0103 formate dehydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; IMG reference gene:2504784546; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing.
    
 0.908
AEE14764.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: shn:Shewana3_0103 formate dehydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; IMG reference gene:2504784550; PFAM: Formate dehydrogenase N, transmembrane; 4Fe-4S binding domain; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing.
    
 0.908
AEE14766.1
Molybdopterin oxidoreductase Fe4S4 region; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963; KEGG: tjr:TherJR_0769 molybdopterin oxidoreductase Fe4s4 region; PFAM: Molybdopterin oxidoreductase Fe4S4 region; SPTR: Formate dehydrogenase; IMG reference gene:2504784552; PFAM: Molybdopterin oxidoreductase Fe4S4 domain.
     
 0.906
AEE14983.1
COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR011808:IPR005117:IPR006067:IPR001450; KEGG: chy:CHY_2409 dissimilatory sulfite reductase subunit B; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Hydrogensulfite reductase; SPTR: Dissimilatory sulfite reductase beta subunit; TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; IMG reference gene:2504784777; PFAM: Nitrite and sulphite reductase 4Fe- [...]
     
 0.906
AEE14761.1
Formate dehydrogenase, alpha subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006443:IPR006311:IPR006963:IPR006656:IPR 006657; KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; IMG reference gene:2504784547; [...]
     
 0.905
AEE14765.1
Nitrate reductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657; KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase, alpha subunit; IMG reference gene:2504784551; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Belongs to the prokaryotic molybdopterin-containing oxid [...]
     
 0.905
AEE14134.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: csc:Csac_1460 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; PRIAM: Pyruvate synthase; SPTR: Pyruvate ferredoxin oxidoreductase, alpha subunit; IMG reference gene:2504783873; PFAM: domain; Transketolase, C-terminal domain.
     
 0.903
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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