STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13732.1Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_0760 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region; IMG reference gene:2504783443; PFAM: Integrase core domain. (349 aa)    
Predicted Functional Partners:
AEE13733.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611:IPR003593; KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; IMG reference gene:2504783444; PFAM: IstB-like ATP binding protein.
  
 0.956
AEE13731.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611:IPR003593; KEGG: ddf:DEFDS_0282 transposase IS21 family; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: Transposase, IS21 family; IMG reference gene:2504783442; PFAM: IstB-like ATP binding protein; Belongs to the DnaA family.
  
 0.913
AEE14051.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; IMG reference gene:2504783786; PFAM: IstB-like ATP binding protein.
  
 0.814
AEE14731.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; IMG reference gene:2504784511; PFAM: IstB-like ATP binding protein.
  
 0.814
AEE14455.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611:IPR003593; KEGG: ddf:DEFDS_0282 transposase IS21 family; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: Transposase, IS21 family; IMG reference gene:2504784216; PFAM: IstB-like ATP binding protein; Belongs to the DnaA family.
  
 0.813
AEE13730.1
KEGG: ddf:DEFDS_0281 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504783441.
 
    
0.688
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.