STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13745.1COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR006547; KEGG: rme:Rmet_2075 respiratory nitrate reductase subunit beta; PRIAM: Nitrate reductase; SPTR: Nitrate reductase 1, beta (Fe-S) subunit; TIGRFAM: Nitrate reductase, beta subunit; IMG reference gene:2504783457; TIGRFAM: nitrate reductase, beta subunit. (478 aa)    
Predicted Functional Partners:
AEE13744.1
COGs: COG5013 Nitrate reductase alpha subunit; InterPro IPR006468:IPR006656:IPR006657; KEGG: aeh:Mlg_1003 respiratory nitrate reductase alpha subunit apoprotein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Nitrate reductase, alpha subunit; TIGRFAM: Nitrate reductase, alpha subunit; IMG reference gene:2504783456; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.999
AEE13748.1
COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: bpt:Bpet3824 nitrate reductase gamma chain; PFAM: Nitrate reductase, gamma subunit; PRIAM: Nitrate reductase; SPTR: Respiratory nitrate reductase, gamma subunit; TIGRFAM: Nitrate reductase, gamma subunit; IMG reference gene:2504783460; PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit.
 
 0.999
AEE13747.1
Nitrate reductase molybdenum cofactor assembly chaperone; COGs: COG2180 Nitrate reductase delta subunit; InterPro IPR003765; KEGG: har:HEAR1660 respiratory nitrate reductase subunit delta; PFAM: Nitrate reductase, delta subunit; SPTR: Nitrate reductase molybdenum cofactor assembly chaperone; TIGRFAM: Nitrate reductase, delta subunit; IMG reference gene:2504783459; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone.
 
 
 0.998
AEE13746.1
Major facilitator superfamily MFS_1; COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: clj:CLJU_c23740 putative permease; PFAM: Major facilitator superfamily MFS-1; SPTR: Predicted permease; IMG reference gene:2504783458; PFAM: Major Facilitator Superfamily.
 
 
 0.997
AEE14987.1
COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: dsy:DSY4518 hypothetical protein; PFAM: Nitrate reductase, gamma subunit; SPTR: Nitrate reductase, gamma subunit; IMG reference gene:2504784781; PFAM: Nitrate reductase gamma subunit.
 
 0.985
AEE14942.1
COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: tye:THEYE_A1777 hypothetical protein; PFAM: Nitrate reductase, gamma subunit; SPTR: Putative uncharacterized protein; IMG reference gene:2504784735; PFAM: Nitrate reductase gamma subunit.
  
 0.981
AEE15047.1
COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: drm:Dred_2913 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: 2-nitropropane dioxygenase, NPD; IMG reference gene:2504784843; PFAM: 2-nitropropane dioxygenase.
    
  0.900
AEE13749.1
COGs: COG0426 flavoprotein; KEGG: mem:Memar_1933 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; IMG reference gene:2504783461; PFAM: Metallo-beta-lactamase superfamily.
       0.718
AEE14183.1
NADPH dehydrogenase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: mma:MM_2395 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; PRIAM: NADPH dehydrogenase; SPTR: NADH:flavin oxidoreductase/NADH oxidase; IMG reference gene:2504783922; PFAM: NADH:flavin oxidoreductase / NADH oxidase family.
    
   0.693
AEE14761.1
Formate dehydrogenase, alpha subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006443:IPR006311:IPR006963:IPR006656:IPR 006657; KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; IMG reference gene:2504784547; [...]
   
 0.644
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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