STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13783.1ABC-type transporter, integral membrane subunit; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: lip:LI0338 branched chain amino acid ABC transporter, permease protein; PFAM: Bacterial inner-membrane translocator; SPTR: High-affinity branched-chain amino acid ABC transporter (Permease protein); manually curated; IMG reference gene:2504783499; PFAM: Branched-chain amino acid transport system / permease component. (302 aa)    
Predicted Functional Partners:
AEE13784.1
ABC-type transporter, integral membrane subunit; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); putative branched-chain amino acid transport protein; IMG reference gene:2504783500; PFAM: Branched-chain amino acid transport system / permease component.
 
0.999
AEE13785.1
Monosaccharide-transporting ATPase; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein LivG; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid transport ATP-binding protein livG; IMG reference gene:2504783501; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 0.999
AEE13786.1
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: gct:GC56T3_0529 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter (ATP-binding protein); IMG reference gene:2504783502; PFAM: ABC transporter.
 
 0.999
AEE13782.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: eba:ebA3175 putative amino acid ABC transporter; PFAM: Extracellular ligand-binding receptor; SPTR: Putative amino acid ABC transporter; IMG reference gene:2504783498; PFAM: Receptor family ligand binding region.
 
 0.997
AEE13889.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tmz:Tmz1t_2471 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2504783609; PFAM: Receptor family ligand binding region.
 
 0.991
AEE14340.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: mno:Mnod_1741 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2504784086; PFAM: Receptor family ligand binding region.
 
 0.991
AEE13781.1
InterPro IPR001119; KEGG: vpr:Vpar_0227 S-layer domain protein; PFAM: S-layer homology region; SPTR: S-layer domain protein domain protein; IMG reference gene:2504783497; PFAM: Protein of unknown function (DUF3373); S-layer homology domain.
  
    0.438
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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