STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE14091.1Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251; KEGG: mev:Metev_2148 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; IMG reference gene:2504783829; PFAM: Rubrerythrin. (190 aa)    
Predicted Functional Partners:
AEE14092.1
Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: dba:Dbac_2515 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin-type Fe(Cys)4 protein; IMG reference gene:2504783830; PFAM: Rubredoxin.
  
  
 0.881
AEE15122.1
Hydrogenase, Fe-only; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR013352:IPR001041:IPR019574:IPR001450:IPR 004108:IPR003149; KEGG: tye:THEYE_A1727 hydrogenase-1; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Iron hydrogenase, small subunit-like; SPTR: Hydrogenase-1; TIGRFAM: Iron hydrogenase, subset; IMG reference gene:2504784922; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster b [...]
    
 0.821
AEE13787.1
COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462:IPR004793:IPR002742; KEGG: desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx; SPTR: Desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region; IMG reference gene:2504783503; PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.
 
  
 0.660
AEE15131.1
Hydrogenase, Fe-only; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterPro IPR013352:IPR001450:IPR004108; KEGG: tye:THEYE_A1726 hydrogenase; PFAM: Iron hydrogenase, large subunit, C-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Ferredoxin hydrogenase; SPTR: Hydrogenase; TIGRFAM: Iron hydrogenase, subset; IMG reference gene:2504784931; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; TIGRFAM: hydrogenase, Fe-only.
      0.657
AEE14898.1
Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ferric-uptake regulator; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; IMG reference gene:2504784690; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.540
AEE15368.1
Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: mba:Mbar_A3353 flavoprotein A; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Flavoprotein A; IMG reference gene:2504785178; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily.
 
  
 0.492
AEE14093.1
KEGG: hypothetical protein; SPTR: NHL repeat containing protein; IMG reference gene:2504783831.
       0.476
AEE14094.1
Hypothetical protein; IMG reference gene:2504783832.
       0.476
AEE15415.1
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: sta:STHERM_c09230 hypothetical protein; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Putative uncharacterized protein; TIGRFAM: Flagellar motor switch protein FliM; IMG reference gene:2504785226; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
    
 
 0.453
AEE14784.1
Rubrerythrin; KEGG: ttm:Tthe_0972 rubrerythrin; SPTR: Rubrerythrin; IMG reference gene:2504784571; PFAM: Rubrerythrin.
  
  
 0.417
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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