Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE14636.1Methyltransferase type 11; InterPro IPR013216; KEGG: dal:Dalk_3488 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; IMG reference gene:2504784404; PFAM: Methyltransferase domain. (401 aa)    
Predicted Functional Partners:
AEE14635.1
Protein of unknown function DUF1722; COGs: COG3272 conserved hypothetical protein; InterPro IPR007553:IPR013560; KEGG: dtu:Dtur_1655 protein of unknown function DUF1722; PFAM: Protein of unknown function DUF1722; Protein of unknown function DUF523; SPTR: Putative uncharacterized protein; IMG reference gene:2504784403; PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722).
 
     0.730
AEE14637.1
DNA photolyase FAD-binding protein; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: cni:Calni_0037 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: Deoxyribodipyrimidine photo-lyase; IMG reference gene:2504784405; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: photolyase PhrII.
 
     0.684
AEE14040.1
COGs: COG1216 glycosyltransferase; InterPro IPR013217:IPR001173; KEGG: hya:HY04AAS1_1576 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; Methyltransferase type 12; SPTR: Glycosyl transferase family 2; IMG reference gene:2504783774; PFAM: Methionine biosynthesis protein MetW; Glycosyl transferase family 2.
  
 
 0.554
AEE14812.1
KEGG: dal:Dalk_0286 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784601; PFAM: Uncharacterised protein family (UPF0153).
  
 
   0.521
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
     
 0.501
AEE14553.1
KEGG: sat:SYN_00675 putative cytoplasmic protein; SPTR: Hypothetical cytosolic protein; IMG reference gene:2504784318.
  
     0.478
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
  
 0.460
AEE14630.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.459
AEE14638.1
Protein of unknown function DUF996; COGs: COG2245 membrane protein; InterPro IPR010397; KEGG: hya:HY04AAS1_1624 protein of unknown function DUF996; PFAM: Protein of unknown function DUF996; SPTR: Putative uncharacterized protein; IMG reference gene:2504784406; PFAM: Protein of unknown function (DUF996).
       0.439
AEE14633.1
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
       0.436
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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