STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE15061.1InterPro IPR001119; KEGG: vpr:Vpar_0227 S-layer domain protein; PFAM: S-layer homology region; SPTR: S-layer domain protein domain protein; IMG reference gene:2504784858; PFAM: Protein of unknown function (DUF3373); S-layer homology domain. (543 aa)    
Predicted Functional Partners:
AEE15397.1
COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: dth:DICTH_0671 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504785208; PFAM: Protein of unknown function (DUF3084).
  
     0.775
AEE14868.1
KEGG: aar:Acear_2172 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784658.
  
     0.773
AEE13707.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: aar:Acear_2201 surface antigen (D15); PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen (D15); IMG reference gene:2504783418; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
   
 0.770
AEE14223.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.768
AEE15398.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: afn:Acfer_1675 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease, YjgP/YjgQ family; IMG reference gene:2504785209; PFAM: Predicted permease YjgP/YjgQ family.
  
     0.757
AEE13941.1
Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345; KEGG: dth:DICTH_1302 CsaB protein; PFAM: Polysaccharide pyruvyl transferase; SPTR: CsaB protein; IMG reference gene:2504783663; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB.
  
     0.752
AEE14401.1
KEGG: hor:Hore_16410 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784155.
  
     0.743
AEE15276.1
KEGG: aar:Acear_2203 peptidase S55 SpoIVB; SPTR: Peptidase S55 SpoIVB; IMG reference gene:2504785082; PFAM: SpoIVB peptidase S55.
  
     0.722
AEE14310.1
COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: aco:Amico_0841 cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; IMG reference gene:2504784056; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
  
    0.671
AEE14744.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: afn:Acfer_1698 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; IMG reference gene:2504784527; PFAM: Outer membrane efflux protein.
  
     0.662
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.