STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE15347.1MORN repeat-containing protein; COGs: COG4642 conserved hypothetical protein; InterPro IPR003409; KEGG: tet:TTHERM_00584930 hypothetical protein; PFAM: MORN motif; SMART: MORN motif; SPTR: Morn motif-containing protein; IMG reference gene:2504785157; PFAM: MORN repeat. (254 aa)    
Predicted Functional Partners:
AEE15348.1
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167; KEGG: adg:Adeg_0633 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor; SPTR: Iron (Metal) dependent repressor, DtxR family; IMG reference gene:2504785158; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
       0.515
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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