F4RM89_MELLP protein (Melampsora laricipopulina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F4RM89_MELLP

Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1639 aa)

Predicted Functional Partners:

F4RBR9_MELLP

0.759

F4RX36_MELLP

0.741

F4S9A3_MELLP

0.741

F4RGL0_MELLP

0.739

F4R5S2_MELLP

0.673

F4RPN4_MELLP

0.654

F4RPP2_MELLP

0.639

F4RNF8_MELLP

0.637

F4RQA2_MELLP

0.583

F4S8S5_MELLP

0.583

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4R5S2_MELLP	F4RBR9_MELLP	F4R5S2	F4RBR9	Dsl1_C domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.677
F4R5S2_MELLP	F4RGL0_MELLP	F4R5S2	F4RGL0	Dsl1_C domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.649
F4R5S2_MELLP	F4RM89_MELLP	F4R5S2	F4RM89	Dsl1_C domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.673
F4R5S2_MELLP	F4RQA2_MELLP	F4R5S2	F4RQA2	Dsl1_C domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.491
F4R5S2_MELLP	F4S8S5_MELLP	F4R5S2	F4S8S5	Dsl1_C domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.491
F4RBR9_MELLP	F4R5S2_MELLP	F4RBR9	F4R5S2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Dsl1_C domain-containing protein.	0.677
F4RBR9_MELLP	F4RGL0_MELLP	F4RBR9	F4RGL0	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.956
F4RBR9_MELLP	F4RM89_MELLP	F4RBR9	F4RM89	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.759
F4RBR9_MELLP	F4RNF8_MELLP	F4RBR9	F4RNF8	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.646
F4RBR9_MELLP	F4RQA2_MELLP	F4RBR9	F4RQA2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.761
F4RBR9_MELLP	F4RX36_MELLP	F4RBR9	F4RX36	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.691
F4RBR9_MELLP	F4S8S5_MELLP	F4RBR9	F4S8S5	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.761
F4RBR9_MELLP	F4S9A3_MELLP	F4RBR9	F4S9A3	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.691
F4RGL0_MELLP	F4R5S2_MELLP	F4RGL0	F4R5S2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Dsl1_C domain-containing protein.	0.649
F4RGL0_MELLP	F4RBR9_MELLP	F4RGL0	F4RBR9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.956
F4RGL0_MELLP	F4RM89_MELLP	F4RGL0	F4RM89	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.739
F4RGL0_MELLP	F4RNF8_MELLP	F4RGL0	F4RNF8	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.746
F4RGL0_MELLP	F4RPN4_MELLP	F4RGL0	F4RPN4	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	SEC7 domain-containing protein.	0.646
F4RGL0_MELLP	F4RQA2_MELLP	F4RGL0	F4RQA2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.834
F4RGL0_MELLP	F4RX36_MELLP	F4RGL0	F4RX36	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.893

page 1 of 4

Server load: low (30%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About