node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MALL_0157 | MALL_0396 | MALL_0157 | MALL_0396 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Hypothetical protein; Identified by glimmer; putative. | 0.937 |
MALL_0157 | MALL_0731 | MALL_0157 | MALL_0731 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | 0.986 |
MALL_0157 | dnaX | MALL_0157 | MALL_0400 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397. | 0.937 |
MALL_0157 | rplJ | MALL_0157 | MALL_0834 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.720 |
MALL_0157 | rplU | MALL_0157 | MALL_0691 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.765 |
MALL_0157 | rpsF | MALL_0157 | MALL_0158 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.962 |
MALL_0157 | rpsG | MALL_0157 | MALL_0360 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.719 |
MALL_0157 | rpsJ | MALL_0157 | MALL_0583 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.746 |
MALL_0157 | rpsR | MALL_0157 | MALL_0156 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.845 |
MALL_0157 | topA | MALL_0157 | MALL_0160 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.960 |
MALL_0396 | MALL_0157 | MALL_0396 | MALL_0157 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.937 |
MALL_0396 | MALL_0731 | MALL_0396 | MALL_0731 | Hypothetical protein; Identified by glimmer; putative. | Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | 0.992 |
MALL_0396 | dnaX | MALL_0396 | MALL_0400 | Hypothetical protein; Identified by glimmer; putative. | DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397. | 0.977 |
MALL_0396 | topA | MALL_0396 | MALL_0160 | Hypothetical protein; Identified by glimmer; putative. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.550 |
MALL_0731 | MALL_0157 | MALL_0731 | MALL_0157 | Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.986 |
MALL_0731 | MALL_0396 | MALL_0731 | MALL_0396 | Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | Hypothetical protein; Identified by glimmer; putative. | 0.992 |
MALL_0731 | dnaX | MALL_0731 | MALL_0400 | Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397. | 0.994 |
MALL_0731 | topA | MALL_0731 | MALL_0160 | Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.628 |
dnaX | MALL_0157 | MALL_0400 | MALL_0157 | DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397. | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.937 |
dnaX | MALL_0396 | MALL_0400 | MALL_0396 | DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397. | Hypothetical protein; Identified by glimmer; putative. | 0.977 |