STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALL_0366ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (697 aa)    
Predicted Functional Partners:
MALL_0364
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.987
MALL_0365
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.987
MALL_0390
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.969
MALL_0389
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.946
MALL_0368
Conserved hypothetical protein; Identified by match to protein family HMM PF03202; match to protein family HMM PF03305.
 
  
 0.935
MALL_0388
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
  
 
0.933
MALL_0367
Identified by match to protein family HMM PF00565.
 
   
 0.931
MALL_0793
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  
 
0.866
MALL_0392
Conserved hypothetical protein.
  
 0.772
MALL_0792
Conserved hypothetical protein.
 
 0.745
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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