STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALL_0392Conserved hypothetical protein. (814 aa)    
Predicted Functional Partners:
MALL_0364
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.931
MALL_0790
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.931
MALL_0388
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 0.910
MALL_0390
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.907
MALL_0389
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 
 0.816
potA
ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 0.797
MALL_0366
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 0.797
MALL_0793
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.797
MALL_0365
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.789
MALL_0792
Conserved hypothetical protein.
  
 0.789
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.