Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MALL_0440 | MALL_0525 | MALL_0440 | MALL_0525 | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | 0.470 |
| MALL_0440 | MALL_0549 | MALL_0440 | MALL_0549 | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. | 0.451 |
| MALL_0440 | MALL_0749 | MALL_0440 | MALL_0749 | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.475 |
| MALL_0440 | glyA | MALL_0440 | MALL_0820 | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.482 |
| MALL_0525 | MALL_0440 | MALL_0525 | MALL_0440 | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.470 |
| MALL_0525 | MALL_0549 | MALL_0525 | MALL_0549 | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. | 0.584 |
| MALL_0525 | glyA | MALL_0525 | MALL_0820 | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.696 |
| MALL_0549 | MALL_0440 | MALL_0549 | MALL_0440 | Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.451 |
| MALL_0549 | MALL_0525 | MALL_0549 | MALL_0525 | Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | 0.584 |
| MALL_0549 | MALL_0749 | MALL_0549 | MALL_0749 | Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.446 |
| MALL_0749 | MALL_0440 | MALL_0749 | MALL_0440 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.475 |
| MALL_0749 | MALL_0549 | MALL_0749 | MALL_0549 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. | 0.446 |
| MALL_0749 | glyA | MALL_0749 | MALL_0820 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.645 |
| glyA | MALL_0440 | MALL_0820 | MALL_0440 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Putative glycerol uptake facilitator; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.482 |
| glyA | MALL_0525 | MALL_0820 | MALL_0525 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | 0.696 |
| glyA | MALL_0749 | MALL_0820 | MALL_0749 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.645 |