polC protein (Mycoplasma alligatoris) - STRING interaction network

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Score

polC

DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (1432 aa)

Predicted Functional Partners:

MALL_0731

0.886

dnaX

0.878

dnaN

0.872

MALL_0832

0.872

MALL_0396

0.842

whiA

0.759

ligA

0.678

MALL_0262

0.651

uvrC

0.645

cdsA

0.622

Your Current Organism:

Mycoplasma alligatoris

NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MALL_0262	MALL_0731	MALL_0262	MALL_0731	Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.497
MALL_0262	dnaN	MALL_0262	MALL_0456	Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.	DNA polymerase III, beta subunit; Identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663.	0.876
MALL_0262	ligA	MALL_0262	MALL_0614	Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.	DNA ligase (NAD(+)); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.	0.751
MALL_0262	polC	MALL_0262	MALL_0480	Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.	DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.651
MALL_0262	uvrC	MALL_0262	MALL_0109	Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.	Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.	0.597
MALL_0396	MALL_0731	MALL_0396	MALL_0731	Hypothetical protein; Identified by glimmer; putative.	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.969
MALL_0396	MALL_0832	MALL_0396	MALL_0832	Hypothetical protein; Identified by glimmer; putative.	DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.	0.972
MALL_0396	dnaN	MALL_0396	MALL_0456	Hypothetical protein; Identified by glimmer; putative.	DNA polymerase III, beta subunit; Identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663.	0.975
MALL_0396	dnaX	MALL_0396	MALL_0400	Hypothetical protein; Identified by glimmer; putative.	DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397.	0.970
MALL_0396	ligA	MALL_0396	MALL_0614	Hypothetical protein; Identified by glimmer; putative.	DNA ligase (NAD(+)); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.	0.513
MALL_0396	polC	MALL_0396	MALL_0480	Hypothetical protein; Identified by glimmer; putative.	DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.842
MALL_0396	uvrC	MALL_0396	MALL_0109	Hypothetical protein; Identified by glimmer; putative.	Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.	0.409
MALL_0731	MALL_0262	MALL_0731	MALL_0262	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.	0.497
MALL_0731	MALL_0396	MALL_0731	MALL_0396	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Hypothetical protein; Identified by glimmer; putative.	0.969
MALL_0731	MALL_0832	MALL_0731	MALL_0832	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.	0.983
MALL_0731	dnaN	MALL_0731	MALL_0456	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, beta subunit; Identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663.	0.981
MALL_0731	dnaX	MALL_0731	MALL_0400	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, subunit gamma and tau; Identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397.	0.976
MALL_0731	ligA	MALL_0731	MALL_0614	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA ligase (NAD(+)); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.	0.742
MALL_0731	polC	MALL_0731	MALL_0480	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.886
MALL_0731	uvrC	MALL_0731	MALL_0109	Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.	0.697

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