MALL_0504 protein (Mycoplasma alligatoris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MALL_0504

Phage tail component, N-terminal domain protein. (533 aa)

Predicted Functional Partners:

smc

0.421

rnc

0.418

plsX

0.418

MALL_0509

0.418

MALL_0510

0.418

Your Current Organism:

Mycoplasma alligatoris

NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MALL_0504	MALL_0509	MALL_0504	MALL_0509	Phage tail component, N-terminal domain protein.	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	0.418
MALL_0504	MALL_0510	MALL_0504	MALL_0510	Phage tail component, N-terminal domain protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	0.418
MALL_0504	plsX	MALL_0504	MALL_0508	Phage tail component, N-terminal domain protein.	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	0.418
MALL_0504	rnc	MALL_0504	MALL_0507	Phage tail component, N-terminal domain protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.418
MALL_0504	smc	MALL_0504	MALL_0506	Phage tail component, N-terminal domain protein.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.421
MALL_0509	MALL_0504	MALL_0509	MALL_0504	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	Phage tail component, N-terminal domain protein.	0.418
MALL_0509	MALL_0510	MALL_0509	MALL_0510	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	0.792
MALL_0509	plsX	MALL_0509	MALL_0508	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	0.839
MALL_0509	rnc	MALL_0509	MALL_0507	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.837
MALL_0509	smc	MALL_0509	MALL_0506	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.835
MALL_0510	MALL_0504	MALL_0510	MALL_0504	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	Phage tail component, N-terminal domain protein.	0.418
MALL_0510	MALL_0509	MALL_0510	MALL_0509	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	0.792
MALL_0510	plsX	MALL_0510	MALL_0508	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	0.792
MALL_0510	rnc	MALL_0510	MALL_0507	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.791
MALL_0510	smc	MALL_0510	MALL_0506	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.786
plsX	MALL_0504	MALL_0508	MALL_0504	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	Phage tail component, N-terminal domain protein.	0.418
plsX	MALL_0509	MALL_0508	MALL_0509	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.	0.839
plsX	MALL_0510	MALL_0508	MALL_0510	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.	0.792
plsX	rnc	MALL_0508	MALL_0507	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.883
plsX	smc	MALL_0508	MALL_0506	Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.833

page 1 of 2

Server load: high (92%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About